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I installed quast version 5.2.0 via bioconda.
Python version is 3.8.13.
f.seek(block_counter * _buffer, os.SEEK_END) throws an error UnsupportedOperation: can't do nonzero end-relative seeks.
The document says In text files (those opened without a b in the mode string), only seeks relative to the beginning of the file are allowed (the exception being seeking to the very file end with seek(0, 2)).
Then, the exception is caught, and all lines are read.
My combined_reference.bed has a header that does not start with "#".
Therefore, the header is tried to be cast into int in (align1 = (int(fs[1]), int(fs[2]), correct_name(fs[0]), fs[6])) and throws an error ValueError: invalid literal for int() with base 10: 'START_A'.
The text was updated successfully, but these errors were encountered:
I installed quast version 5.2.0 via bioconda.
Python version is 3.8.13.
f.seek(block_counter * _buffer, os.SEEK_END)
throws an errorUnsupportedOperation: can't do nonzero end-relative seeks
.The document says
In text files (those opened without a b in the mode string), only seeks relative to the beginning of the file are allowed (the exception being seeking to the very file end with seek(0, 2))
.Then, the exception is caught, and all lines are read.
My combined_reference.bed has a header that does not start with "#".
Therefore, the header is tried to be cast into int in (
align1 = (int(fs[1]), int(fs[2]), correct_name(fs[0]), fs[6])
) and throws an errorValueError: invalid literal for int() with base 10: 'START_A'
.The text was updated successfully, but these errors were encountered: