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OpenDEP Compute it's an open-source software for dielectrophoresis (DEP) spectra conversion, analysis and fitting. It is a part of the OpenDEP platform.

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IoanTivig/OpenDEP_Compute

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OpenDEP Compute

Dielectrophoresis (DEP) experiments conversion to spectra / spectra fitting software. With this software you can convert sets of images obtained manualy or with OpenDEP Control and fitting the obtained DEP spectra with one of the two implemented functions: Homogenous particle or single-shell.

It is a part of OpenDEP project, and one of the three programs developed:

  1. OpenDEP Compute (for spectra fitting and data conversion)
  2. OpenDEP Control (for experiments automation and control of machines)
  3. OpenDEP View (for visualization of spectra and spectra generation based on parameters)

Published under GNU GPL v3.0 license.

Installation

  1. Download the latest release from this repository.
  2. Add the repository to your IDE (tested with PyCharm).
  3. Install the requirements from requirements.txt file.
  4. Run the main.py file.
  5. Enjoy!

PS: Soon the software will be available as a standalone executable file. If you need any help with the installation, please contact me.

Publications

If you use this software in your research, please be kind and cite the following papers:

  1. OpenDEP: An Open-Source Platform for Dielectrophoresis Spectra Acquisition and Analysis

Other DEP Tools (not developed by me)

  1. MyDEP

Other

Please be aware that the software is still in development, so bugs may occur. If you find any bugs, please contact me. The software is tested on Windows 11, but it should work on other operating systems as well.

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OpenDEP Compute it's an open-source software for dielectrophoresis (DEP) spectra conversion, analysis and fitting. It is a part of the OpenDEP platform.

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