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Funke lab

Janelia Research Campus

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  1. gunpowder gunpowder Public

    A library to facilitate machine learning on multi-dimensional images.

    Python 76 54

  2. lsd lsd Public

    🌈

    Python 52 28

  3. daisy daisy Public

    Block-wise task scheduling for large nD volumes.

    Python 26 17

  4. motile motile Public

    Multi-Object Tracker using Integer Linear Equations

    Python 24 5

  5. cellulus cellulus Public

    Unsupervised Instance Segmentation in Microscopy

    Python 19 1

  6. linajea linajea Public

    Python 17 7

Repositories

Showing 10 of 69 repositories
  • motile_napari_plugin Public

    A napari plugin for tracking with motile

    funkelab/motile_napari_plugin’s past year of commit activity
    Python 5 BSD-3-Clause 2 18 1 Updated Oct 4, 2024
  • spatial_graph Public

    A spatial graph datastructure for python

    funkelab/spatial_graph’s past year of commit activity
    C++ 2 MIT 0 2 0 Updated Oct 3, 2024
  • motile Public

    Multi-Object Tracker using Integer Linear Equations

    funkelab/motile’s past year of commit activity
    Python 24 MIT 5 18 1 Updated Sep 30, 2024
  • funlib.learn.torch Public

    Pytorch Models

    funkelab/funlib.learn.torch’s past year of commit activity
    Python 6 12 2 6 Updated Sep 25, 2024
  • gunpowder Public

    A library to facilitate machine learning on multi-dimensional images.

    funkelab/gunpowder’s past year of commit activity
    Python 76 MIT 54 8 2 Updated Sep 25, 2024
  • motile_toolbox Public

    A toolbox for tracking with motile, including constructing candidate graphs and computing common features.

    funkelab/motile_toolbox’s past year of commit activity
    Python 4 1 2 2 Updated Sep 19, 2024
  • napari Public Forked from napari/napari

    napari: a fast, interactive, multi-dimensional image viewer for python

    funkelab/napari’s past year of commit activity
    Python 0 BSD-3-Clause 424 0 0 Updated Sep 16, 2024
  • daisy Public

    Block-wise task scheduling for large nD volumes.

    funkelab/daisy’s past year of commit activity
    Python 26 MIT 17 4 1 Updated Sep 12, 2024
  • funlib.persistence Public

    Interfaces for data (arrays and graphs) and storage formats (databases and file formats)

    funkelab/funlib.persistence’s past year of commit activity
    Python 3 MIT 9 3 2 Updated Sep 12, 2024
  • blinx Public
    funkelab/blinx’s past year of commit activity
    Python 2 2 5 0 Updated Sep 3, 2024
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