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- Nextstrain build for novel coronavirus SARS-CoV-2
WNV
Publicncov-ingest
Publicpathogen-repo-guide
Public templatecli
PublicThe Nextstrain command-line interface (CLI)—a program called nextstrain—which aims to provide a consistent way to run and visualize pathogen builds and access Nextstrain components like Augur and Auspice across computing environments such as Docker, Conda, and AWS Batch.- SARS-CoV-2 variant growth rates and frequency forecasts
lassa
Publicfauna
Publicaugur
Publicoropouche
Publicavian-flu
Publicmpox
PublicNextstrain build for mpox virusseasonal-flu
Publicyellow-fever
Publicnextclade_data
PublicDatasets for https://github.com/nextstrain/nextcladezika
Publicmeasles
Publicconda-base
Publicdocs.nextstrain.org
Publicnextclade
Publicauspice.us
Publicseasonal-cov
Publicbioconda-recipes
Publicdocker-base
Public.github
Publicrabies
Public